Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim42Q9D2H5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Gm10819-201ENSMUST00000099988 561 ntBASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim42Q9D2H5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim42Q9D2H5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Trim42Q9D2H5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trim42Q9D2H5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trim42Q9D2H5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim42Q9D2H5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Trim42Q9D2H5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Gm2272-201ENSMUST00000194903 582 ntBASIC14□□□□□ -0.17
Trim42Q9D2H5 Gm45167-201ENSMUST00000208007 322 ntBASIC14□□□□□ -0.17
Trim42Q9D2H5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim42Q9D2H5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim42Q9D2H5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14□□□□□ -0.17
Trim42Q9D2H5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim42Q9D2H5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms