Protein–RNA interactions for Protein: Q9D1B9

Mrpl28, 39S ribosomal protein L28, mitochondrial, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl28Q9D1B9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mrpl28Q9D1B9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mrpl28Q9D1B9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Mrpl28Q9D1B9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mrpl28Q9D1B9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mrpl28Q9D1B9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Mrpl28Q9D1B9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Gm28659-201ENSMUST00000188013 759 ntBASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mrpl28Q9D1B9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Gm13036-201ENSMUST00000117799 748 ntBASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mrpl28Q9D1B9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Mrpl28Q9D1B9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mrpl28Q9D1B9 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Mrpl28Q9D1B9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mrpl28Q9D1B9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mrpl28Q9D1B9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mrpl28Q9D1B9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mrpl28Q9D1B9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mrpl28Q9D1B9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl28Q9D1B9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl28Q9D1B9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl28Q9D1B9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl28Q9D1B9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mrpl28Q9D1B9 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.14□□□□□ -0.47
Mrpl28Q9D1B9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Mrpl28Q9D1B9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms