Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Gm2445-201ENSMUST00000182798 989 ntBASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snf8Q9CZ28 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Snf8Q9CZ28 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Snf8Q9CZ28 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gm44492-201ENSMUST00000197012 141 ntBASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gm18206-201ENSMUST00000207027 926 ntBASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Snf8Q9CZ28 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Gm15427-201ENSMUST00000117288 531 ntBASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Gm18041-201ENSMUST00000218210 618 ntBASIC14.38□□□□□ -0.11
Snf8Q9CZ28 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.38□□□□□ -0.11
Snf8Q9CZ28 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms