Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nip7Q9CXK8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nip7Q9CXK8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nip7Q9CXK8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nip7Q9CXK8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nip7Q9CXK8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nip7Q9CXK8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Nip7Q9CXK8 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.33■□□□□ 0.37
Nip7Q9CXK8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Gm23931-201ENSMUST00000103842 109 ntBASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Gm15198-201ENSMUST00000117283 177 ntBASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Gm12384-201ENSMUST00000119228 919 ntBASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.33■□□□□ 0.36
Nip7Q9CXK8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Gm8598-201ENSMUST00000221184 836 ntBASIC17.33■□□□□ 0.36
Nip7Q9CXK8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nip7Q9CXK8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Mir1247-201ENSMUST00000116706 82 ntBASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nip7Q9CXK8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Gm43818-201ENSMUST00000200605 466 ntBASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Gm24447-201ENSMUST00000083977 338 ntBASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nip7Q9CXK8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nip7Q9CXK8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nip7Q9CXK8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nip7Q9CXK8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nip7Q9CXK8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nip7Q9CXK8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nip7Q9CXK8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nip7Q9CXK8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms