Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 BC001981-202ENSMUST00000191393 1545 ntBASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cstf3Q99LI7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Gm13015-201ENSMUST00000118674 204 ntBASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Mir6990-201ENSMUST00000183724 91 ntBASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Gm43125-201ENSMUST00000201724 730 ntBASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf3Q99LI7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cstf3Q99LI7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cstf3Q99LI7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cstf3Q99LI7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cstf3Q99LI7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf3Q99LI7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.52□□□□□ -0.25
Cstf3Q99LI7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf3Q99LI7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf3Q99LI7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf3Q99LI7 Gm13823-201ENSMUST00000119930 345 ntBASIC13.52□□□□□ -0.25
Cstf3Q99LI7 AA543401-201ENSMUST00000164248 1269 ntBASIC13.52□□□□□ -0.25
Cstf3Q99LI7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.52□□□□□ -0.25
Cstf3Q99LI7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms