Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.76□□□□□ -0.37
Lims1Q99JW4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.76□□□□□ -0.37
Lims1Q99JW4 Gm17271-201ENSMUST00000165535 355 ntBASIC12.76□□□□□ -0.37
Lims1Q99JW4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 AA619741-201ENSMUST00000195095 646 ntBASIC12.76□□□□□ -0.37
Lims1Q99JW4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.76□□□□□ -0.37
Lims1Q99JW4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.76□□□□□ -0.37
Lims1Q99JW4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.76□□□□□ -0.37
Lims1Q99JW4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.75□□□□□ -0.37
Lims1Q99JW4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.75□□□□□ -0.37
Lims1Q99JW4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.75□□□□□ -0.37
Lims1Q99JW4 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.75□□□□□ -0.37
Lims1Q99JW4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lims1Q99JW4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.75□□□□□ -0.37
Lims1Q99JW4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lims1Q99JW4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Gm14494-201ENSMUST00000118786 435 ntBASIC12.74□□□□□ -0.37
Lims1Q99JW4 Gm13823-201ENSMUST00000119930 345 ntBASIC12.74□□□□□ -0.37
Lims1Q99JW4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Lims1Q99JW4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.74□□□□□ -0.37
Lims1Q99JW4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms