Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.86□□□□□ -0.03
TraipQ8VIG6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Gm15376-201ENSMUST00000122258 783 ntBASIC14.86□□□□□ -0.03
TraipQ8VIG6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.86□□□□□ -0.03
TraipQ8VIG6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.86□□□□□ -0.03
TraipQ8VIG6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.85□□□□□ -0.03
TraipQ8VIG6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Gm15371-201ENSMUST00000117057 784 ntBASIC14.85□□□□□ -0.03
TraipQ8VIG6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.85□□□□□ -0.03
TraipQ8VIG6 Gm12134-201ENSMUST00000122109 520 ntBASIC14.85□□□□□ -0.03
TraipQ8VIG6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Gm44719-201ENSMUST00000206404 149 ntBASIC14.85□□□□□ -0.03
TraipQ8VIG6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Gm5161-201ENSMUST00000075243 853 ntBASIC14.85□□□□□ -0.03
TraipQ8VIG6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TraipQ8VIG6 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.85□□□□□ -0.03
TraipQ8VIG6 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Defa-ps4-201ENSMUST00000118021 183 ntBASIC14.84□□□□□ -0.03
TraipQ8VIG6 Gm12485-201ENSMUST00000119641 291 ntBASIC14.84□□□□□ -0.03
TraipQ8VIG6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TraipQ8VIG6 Gm15429-201ENSMUST00000151268 798 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms