Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 BC001981-202ENSMUST00000191393 1545 ntBASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnajc28Q8VCE1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Gm15393-201ENSMUST00000120499 219 ntBASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dnajc28Q8VCE1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Gm18624-201ENSMUST00000220966 658 ntBASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dnajc28Q8VCE1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Gm12585-201ENSMUST00000117307 290 ntBASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Gm15460-201ENSMUST00000118147 391 ntBASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Mir6392-201ENSMUST00000184924 108 ntBASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dnajc28Q8VCE1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms