Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Gm27301-201ENSMUST00000184012 127 ntBASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.41□□□□□ -0.58
Nup35Q8R4R6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup35Q8R4R6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms