Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cd109Q8R422 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cd109Q8R422 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd109Q8R422 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd109Q8R422 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cd109Q8R422 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd109Q8R422 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd109Q8R422 Gm15198-201ENSMUST00000117283 177 ntBASIC19.64■□□□□ 0.73
Cd109Q8R422 Gm12384-201ENSMUST00000119228 919 ntBASIC19.64■□□□□ 0.73
Cd109Q8R422 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Cd109Q8R422 Gm43818-201ENSMUST00000200605 466 ntBASIC19.64■□□□□ 0.73
Cd109Q8R422 Gm18054-201ENSMUST00000207539 555 ntBASIC19.64■□□□□ 0.73
Cd109Q8R422 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cd109Q8R422 Gm12620-201ENSMUST00000119791 1986 ntBASIC19.64■□□□□ 0.73
Cd109Q8R422 Gm12612-201ENSMUST00000140182 1986 ntBASIC19.64■□□□□ 0.73
Cd109Q8R422 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC19.64■□□□□ 0.73
Cd109Q8R422 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd109Q8R422 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Cd109Q8R422 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd109Q8R422 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd109Q8R422 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Gm37297-201ENSMUST00000192974 2384 ntBASIC19.63■□□□□ 0.73
Cd109Q8R422 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Gm12134-201ENSMUST00000122109 520 ntBASIC19.63■□□□□ 0.73
Cd109Q8R422 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Gm27572-201ENSMUST00000183702 255 ntBASIC19.63■□□□□ 0.73
Cd109Q8R422 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cd109Q8R422 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd109Q8R422 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cd109Q8R422 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cd109Q8R422 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cd109Q8R422 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC19.62■□□□□ 0.73
Cd109Q8R422 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cd109Q8R422 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC19.62■□□□□ 0.73
Cd109Q8R422 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC19.62■□□□□ 0.73
Cd109Q8R422 Gm27682-201ENSMUST00000183930 110 ntBASIC19.62■□□□□ 0.73
Cd109Q8R422 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC19.62■□□□□ 0.73
Cd109Q8R422 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd109Q8R422 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC19.62■□□□□ 0.73
Cd109Q8R422 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd109Q8R422 Gm10040-201ENSMUST00000080726 1662 ntBASIC19.62■□□□□ 0.73
Cd109Q8R422 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cd109Q8R422 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd109Q8R422 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd109Q8R422 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cd109Q8R422 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd109Q8R422 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd109Q8R422 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd109Q8R422 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd109Q8R422 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd109Q8R422 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cd109Q8R422 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd109Q8R422 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd109Q8R422 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd109Q8R422 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cd109Q8R422 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC19.61■□□□□ 0.73
Cd109Q8R422 Gm38144-201ENSMUST00000192790 465 ntBASIC19.61■□□□□ 0.73
Cd109Q8R422 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC19.61■□□□□ 0.73
Cd109Q8R422 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cd109Q8R422 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cd109Q8R422 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cd109Q8R422 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Cd109Q8R422 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cd109Q8R422 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cd109Q8R422 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd109Q8R422 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd109Q8R422 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC19.61■□□□□ 0.73
Cd109Q8R422 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd109Q8R422 Gm11661-201ENSMUST00000121761 1327 ntBASIC19.6■□□□□ 0.73
Cd109Q8R422 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Cd109Q8R422 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd109Q8R422 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd109Q8R422 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Cd109Q8R422 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC19.6■□□□□ 0.73
Cd109Q8R422 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd109Q8R422 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms