Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf7Q8R0S1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf7Q8R0S1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Atf7Q8R0S1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf7Q8R0S1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf7Q8R0S1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf7Q8R0S1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Atf7Q8R0S1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Gm27680-201ENSMUST00000184192 160 ntBASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf7Q8R0S1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.5■□□□□ 0.23
Atf7Q8R0S1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Gm6888-201ENSMUST00000221983 706 ntBASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atf7Q8R0S1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Atf7Q8R0S1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms