Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm27525-201ENSMUST00000184465 107 ntBASIC8.81□□□□□ -1
Cystm1Q8K353 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Gm42670-201ENSMUST00000201816 1292 ntBASIC8.81□□□□□ -1
Cystm1Q8K353 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC8.81□□□□□ -1
Cystm1Q8K353 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Cystm1Q8K353 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Gm15358-201ENSMUST00000119249 520 ntBASIC8.8□□□□□ -1
Cystm1Q8K353 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC8.8□□□□□ -1
Cystm1Q8K353 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Cystm1Q8K353 Gm9727-201ENSMUST00000161387 555 ntBASIC8.8□□□□□ -1
Cystm1Q8K353 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC8.8□□□□□ -1
Cystm1Q8K353 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC8.8□□□□□ -1
Cystm1Q8K353 Mir8117-201ENSMUST00000184773 107 ntBASIC8.8□□□□□ -1
Cystm1Q8K353 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC8.8□□□□□ -1
Cystm1Q8K353 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 AC154595.3-201ENSMUST00000224579 384 ntBASIC8.8□□□□□ -1
Cystm1Q8K353 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC8.8□□□□□ -1
Cystm1Q8K353 Gm5867-201ENSMUST00000063197 592 ntBASIC8.8□□□□□ -1
Cystm1Q8K353 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC8.8□□□□□ -1
Cystm1Q8K353 AC116503.1-201ENSMUST00000215445 2192 ntBASIC8.8□□□□□ -1
Cystm1Q8K353 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cystm1Q8K353 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cystm1Q8K353 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cystm1Q8K353 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cystm1Q8K353 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cystm1Q8K353 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cystm1Q8K353 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Cystm1Q8K353 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cystm1Q8K353 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC8.79□□□□□ -1
Cystm1Q8K353 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cystm1Q8K353 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Cystm1Q8K353 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cystm1Q8K353 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cystm1Q8K353 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cystm1Q8K353 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cystm1Q8K353 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC8.79□□□□□ -1
Cystm1Q8K353 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms