Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn1Q8K0T0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.14■□□□□ 0.18
Rtn1Q8K0T0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rtn1Q8K0T0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rtn1Q8K0T0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rtn1Q8K0T0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Mir7023-201ENSMUST00000185093 64 ntBASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Gm28196-201ENSMUST00000187719 640 ntBASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Gm29741-201ENSMUST00000192667 421 ntBASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn1Q8K0T0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Gm12585-201ENSMUST00000117307 290 ntBASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Gm2445-201ENSMUST00000182798 989 ntBASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Mir497b-201ENSMUST00000093601 125 ntBASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms