Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Gm13418-201ENSMUST00000119097 944 ntBASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Gm18246-201ENSMUST00000221023 728 ntBASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smco3Q8BQM7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smco3Q8BQM7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smco3Q8BQM7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smco3Q8BQM7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smco3Q8BQM7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smco3Q8BQM7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smco3Q8BQM7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Smco3Q8BQM7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smco3Q8BQM7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smco3Q8BQM7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.52□□□□□ -0.56
Smco3Q8BQM7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Gm8749-201ENSMUST00000117737 331 ntBASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Gm13836-201ENSMUST00000121159 501 ntBASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smco3Q8BQM7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms