Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm7774-201ENSMUST00000200064 533 ntBASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh20Q8BIZ0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Gm9824-201ENSMUST00000178707 561 ntBASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh20Q8BIZ0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms