Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rnf38Q8BI21 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.51□□□□□ -0.25
Rnf38Q8BI21 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf38Q8BI21 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Gm25911-201ENSMUST00000157621 56 ntBASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.5□□□□□ -0.25
Rnf38Q8BI21 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.5□□□□□ -0.25
Rnf38Q8BI21 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rnf38Q8BI21 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf38Q8BI21 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf38Q8BI21 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf38Q8BI21 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf38Q8BI21 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms