Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Clrn3Q8BHH8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 AA619741-201ENSMUST00000195095 646 ntBASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.19□□□□□ -0.3
Clrn3Q8BHH8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Gm6222-201ENSMUST00000120787 396 ntBASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn3Q8BHH8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Mir449b-201ENSMUST00000104833 80 ntBASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Gm13015-201ENSMUST00000118674 204 ntBASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Gm7774-201ENSMUST00000200064 533 ntBASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn3Q8BHH8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms