Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Gm18018-201ENSMUST00000198273 408 ntBASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Gm15823-201ENSMUST00000064305 670 ntBASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh8Q7TSK3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Gm6180-201ENSMUST00000065243 498 ntBASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh8Q7TSK3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Gm21470-201ENSMUST00000187680 696 ntBASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh8Q7TSK3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms