Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Clcn1Q64347 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Clcn1Q64347 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Clcn1Q64347 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clcn1Q64347 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.68■□□□□ 0.42
Clcn1Q64347 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.68■□□□□ 0.42
Clcn1Q64347 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.68■□□□□ 0.42
Clcn1Q64347 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Clcn1Q64347 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Clcn1Q64347 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Gm18027-201ENSMUST00000218947 619 ntBASIC17.68■□□□□ 0.42
Clcn1Q64347 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.68■□□□□ 0.42
Clcn1Q64347 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Clcn1Q64347 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.68■□□□□ 0.42
Clcn1Q64347 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Clcn1Q64347 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Clcn1Q64347 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clcn1Q64347 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clcn1Q64347 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clcn1Q64347 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Gm12928-201ENSMUST00000117115 573 ntBASIC17.67■□□□□ 0.42
Clcn1Q64347 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.67■□□□□ 0.42
Clcn1Q64347 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.67■□□□□ 0.42
Clcn1Q64347 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Gm6091-201ENSMUST00000098307 165 ntBASIC17.67■□□□□ 0.42
Clcn1Q64347 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.67■□□□□ 0.42
Clcn1Q64347 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clcn1Q64347 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.67■□□□□ 0.42
Clcn1Q64347 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Clcn1Q64347 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clcn1Q64347 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clcn1Q64347 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.66■□□□□ 0.42
Clcn1Q64347 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Clcn1Q64347 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.66■□□□□ 0.42
Clcn1Q64347 Gm8062-201ENSMUST00000139696 444 ntBASIC17.66■□□□□ 0.42
Clcn1Q64347 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.66■□□□□ 0.42
Clcn1Q64347 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clcn1Q64347 Gm45331-201ENSMUST00000209868 554 ntBASIC17.66■□□□□ 0.42
Clcn1Q64347 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.66■□□□□ 0.42
Clcn1Q64347 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.66■□□□□ 0.42
Clcn1Q64347 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clcn1Q64347 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.66■□□□□ 0.42
Clcn1Q64347 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clcn1Q64347 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clcn1Q64347 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Clcn1Q64347 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms