Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Notch3Q61982 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Notch3Q61982 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Notch3Q61982 Gm17150-201ENSMUST00000165577 381 ntBASIC10.79□□□□□ -0.68
Notch3Q61982 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.79□□□□□ -0.68
Notch3Q61982 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.79□□□□□ -0.68
Notch3Q61982 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Notch3Q61982 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.79□□□□□ -0.68
Notch3Q61982 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Notch3Q61982 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.79□□□□□ -0.68
Notch3Q61982 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.79□□□□□ -0.68
Notch3Q61982 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Notch3Q61982 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.79□□□□□ -0.68
Notch3Q61982 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.79□□□□□ -0.68
Notch3Q61982 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.79□□□□□ -0.68
Notch3Q61982 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Notch3Q61982 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Notch3Q61982 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.78□□□□□ -0.68
Notch3Q61982 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Notch3Q61982 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.78□□□□□ -0.68
Notch3Q61982 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.78□□□□□ -0.68
Notch3Q61982 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Notch3Q61982 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Notch3Q61982 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Notch3Q61982 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Notch3Q61982 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.78□□□□□ -0.68
Notch3Q61982 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.78□□□□□ -0.68
Notch3Q61982 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.78□□□□□ -0.68
Notch3Q61982 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Notch3Q61982 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Notch3Q61982 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.78□□□□□ -0.68
Notch3Q61982 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Notch3Q61982 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Notch3Q61982 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Notch3Q61982 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Notch3Q61982 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Notch3Q61982 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Notch3Q61982 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Notch3Q61982 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.77□□□□□ -0.69
Notch3Q61982 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Notch3Q61982 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.77□□□□□ -0.69
Notch3Q61982 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.77□□□□□ -0.69
Notch3Q61982 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.77□□□□□ -0.69
Notch3Q61982 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Notch3Q61982 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms