Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Gm9540-201ENSMUST00000188230 478 ntBASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps13aQ5H8C4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm12616-201ENSMUST00000118594 382 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm12624-201ENSMUST00000177615 382 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm12621-201ENSMUST00000177760 382 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm12615-201ENSMUST00000177970 382 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm12622-201ENSMUST00000177975 382 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm12627-201ENSMUST00000178412 382 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm12625-201ENSMUST00000179122 382 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm12614-201ENSMUST00000179586 382 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm12613-201ENSMUST00000180323 382 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 AA914427-201ENSMUST00000193194 1166 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm43058-201ENSMUST00000197645 625 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm45118-201ENSMUST00000208928 825 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.56□□□□□ -0.24
Vps13aQ5H8C4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Gm7809-201ENSMUST00000153199 742 ntBASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps13aQ5H8C4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps13aQ5H8C4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms