Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Gm9229-201ENSMUST00000222777 126 ntBASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdkl5Q3UTQ8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Gm13616-201ENSMUST00000120600 222 ntBASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Gm2445-201ENSMUST00000182798 989 ntBASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Gm46209-201ENSMUST00000217912 553 ntBASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkl5Q3UTQ8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Gm14767-201ENSMUST00000121559 586 ntBASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Gm29741-201ENSMUST00000192667 421 ntBASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Cdkl5Q3UTQ8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.21■□□□□ 0.18
Cdkl5Q3UTQ8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdkl5Q3UTQ8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Cdkl5Q3UTQ8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Cdkl5Q3UTQ8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.21■□□□□ 0.18
Cdkl5Q3UTQ8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Gm15460-201ENSMUST00000118147 391 ntBASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.2■□□□□ 0.18
Cdkl5Q3UTQ8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms