Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm14832-201ENSMUST00000121289 322 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm18059-201ENSMUST00000208073 580 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Gm9004-201ENSMUST00000218739 1222 ntBASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ush2AQ2QI47 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Gm6781-201ENSMUST00000038304 1242 ntBASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Gm43399-201ENSMUST00000202546 2374 ntBASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Ush2AQ2QI47 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm20414-201ENSMUST00000172918 646 ntBASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm16372-201ENSMUST00000073088 450 ntBASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm20632-201ENSMUST00000176760 2427 ntBASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm6159-201ENSMUST00000191249 1724 ntBASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm15784-201ENSMUST00000120260 1462 ntBASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm13182-201ENSMUST00000122241 312 ntBASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm43520-201ENSMUST00000197996 164 ntBASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm45598-202ENSMUST00000210719 986 ntBASIC7.21□□□□□ -1.26
Ush2AQ2QI47 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm26917-202ENSMUST00000192833 3329 ntBASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Ush2AQ2QI47 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm4775-201ENSMUST00000169588 402 ntBASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm21027-201ENSMUST00000219300 1236 ntBASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm42657-201ENSMUST00000201746 211 ntBASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Gm3619-201ENSMUST00000219947 775 ntBASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 AC158388.3-202ENSMUST00000225517 775 ntBASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ush2AQ2QI47 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms