Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hspg2Q05793 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm27320-201ENSMUST00000184892 109 ntBASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.05□□□□□ -0.8
Hspg2Q05793 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm15370-201ENSMUST00000117158 253 ntBASIC10.05□□□□□ -0.8
Hspg2Q05793 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm42997-202ENSMUST00000200321 985 ntBASIC10.05□□□□□ -0.8
Hspg2Q05793 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Hspg2Q05793 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hspg2Q05793 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.04□□□□□ -0.8
Hspg2Q05793 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm12566-201ENSMUST00000121479 359 ntBASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm12208-201ENSMUST00000122004 163 ntBASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm16379-201ENSMUST00000161469 348 ntBASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Hspg2Q05793 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm8762-201ENSMUST00000193486 339 ntBASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm43058-201ENSMUST00000197645 625 ntBASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm44545-201ENSMUST00000208262 746 ntBASIC10.04□□□□□ -0.8
Hspg2Q05793 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.04□□□□□ -0.8
Hspg2Q05793 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.04□□□□□ -0.8
Hspg2Q05793 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.04□□□□□ -0.8
Hspg2Q05793 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.04□□□□□ -0.8
Hspg2Q05793 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Hspg2Q05793 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm45770-201ENSMUST00000212105 616 ntBASIC10.04□□□□□ -0.8
Hspg2Q05793 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.04□□□□□ -0.8
Hspg2Q05793 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.04□□□□□ -0.8
Hspg2Q05793 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.04□□□□□ -0.8
Hspg2Q05793 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Hspg2Q05793 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hspg2Q05793 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.03□□□□□ -0.8
Hspg2Q05793 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hspg2Q05793 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms