Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.26□□□□□ -0.13
Thumpd3P97770 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.26□□□□□ -0.13
Thumpd3P97770 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.26□□□□□ -0.13
Thumpd3P97770 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.26□□□□□ -0.13
Thumpd3P97770 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.26□□□□□ -0.13
Thumpd3P97770 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Thumpd3P97770 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.26□□□□□ -0.13
Thumpd3P97770 Gm43125-201ENSMUST00000201724 730 ntBASIC14.26□□□□□ -0.13
Thumpd3P97770 Gm9182-201ENSMUST00000217829 639 ntBASIC14.26□□□□□ -0.13
Thumpd3P97770 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Thumpd3P97770 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.26□□□□□ -0.13
Thumpd3P97770 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Thumpd3P97770 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd3P97770 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Thumpd3P97770 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
Thumpd3P97770 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.25□□□□□ -0.13
Thumpd3P97770 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.25□□□□□ -0.13
Thumpd3P97770 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.25□□□□□ -0.13
Thumpd3P97770 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Thumpd3P97770 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Thumpd3P97770 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Thumpd3P97770 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Thumpd3P97770 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms