Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx3-2P97503 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Gm44855-201ENSMUST00000205725 362 ntBASIC13.24□□□□□ -0.29
Nkx3-2P97503 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.24□□□□□ -0.29
Nkx3-2P97503 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Gm20445-201ENSMUST00000061905 565 ntBASIC13.24□□□□□ -0.29
Nkx3-2P97503 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.23□□□□□ -0.29
Nkx3-2P97503 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.23□□□□□ -0.29
Nkx3-2P97503 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Gm15957-201ENSMUST00000118893 974 ntBASIC13.23□□□□□ -0.29
Nkx3-2P97503 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx3-2P97503 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.23□□□□□ -0.29
Nkx3-2P97503 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.23□□□□□ -0.29
Nkx3-2P97503 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx3-2P97503 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx3-2P97503 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.22□□□□□ -0.29
Nkx3-2P97503 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkx3-2P97503 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Gm21854-201ENSMUST00000179901 471 ntBASIC13.22□□□□□ -0.29
Nkx3-2P97503 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Gm33320-201ENSMUST00000192232 530 ntBASIC13.22□□□□□ -0.29
Nkx3-2P97503 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Gm5186-201ENSMUST00000218781 920 ntBASIC13.22□□□□□ -0.29
Nkx3-2P97503 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.22□□□□□ -0.29
Nkx3-2P97503 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx3-2P97503 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms