Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Hmgb1P63158 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgb1P63158 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Hmgb1P63158 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.41■□□□□ 0.06
Hmgb1P63158 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Hmgb1P63158 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Gm25911-201ENSMUST00000157621 56 ntBASIC15.41■□□□□ 0.06
Hmgb1P63158 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Hmgb1P63158 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.41■□□□□ 0.06
Hmgb1P63158 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.41■□□□□ 0.06
Hmgb1P63158 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Hmgb1P63158 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Hmgb1P63158 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Hmgb1P63158 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgb1P63158 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Hmgb1P63158 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.4■□□□□ 0.06
Hmgb1P63158 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Gm13365-201ENSMUST00000121188 973 ntBASIC15.4■□□□□ 0.06
Hmgb1P63158 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.4■□□□□ 0.06
Hmgb1P63158 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.4■□□□□ 0.06
Hmgb1P63158 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.4■□□□□ 0.06
Hmgb1P63158 Gm9824-201ENSMUST00000178707 561 ntBASIC15.4■□□□□ 0.06
Hmgb1P63158 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Hmgb1P63158 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgb1P63158 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Hmgb1P63158 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.39■□□□□ 0.05
Hmgb1P63158 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Hmgb1P63158 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.39■□□□□ 0.05
Hmgb1P63158 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hmgb1P63158 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hmgb1P63158 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.39■□□□□ 0.05
Hmgb1P63158 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.39■□□□□ 0.05
Hmgb1P63158 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.39■□□□□ 0.05
Hmgb1P63158 Gm45453-201ENSMUST00000211758 853 ntBASIC15.39■□□□□ 0.05
Hmgb1P63158 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hmgb1P63158 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Hmgb1P63158 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Hmgb1P63158 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.39■□□□□ 0.05
Hmgb1P63158 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgb1P63158 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmgb1P63158 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms