Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.32□□□□□ -0.6
Sssca1P56873 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.32□□□□□ -0.6
Sssca1P56873 Gm15483-201ENSMUST00000120338 456 ntBASIC11.32□□□□□ -0.6
Sssca1P56873 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Sssca1P56873 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.32□□□□□ -0.6
Sssca1P56873 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.32□□□□□ -0.6
Sssca1P56873 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.32□□□□□ -0.6
Sssca1P56873 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.32□□□□□ -0.6
Sssca1P56873 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.32□□□□□ -0.6
Sssca1P56873 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sssca1P56873 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.32□□□□□ -0.6
Sssca1P56873 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sssca1P56873 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sssca1P56873 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sssca1P56873 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.31□□□□□ -0.6
Sssca1P56873 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sssca1P56873 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.31□□□□□ -0.6
Sssca1P56873 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Sssca1P56873 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.31□□□□□ -0.6
Sssca1P56873 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.31□□□□□ -0.6
Sssca1P56873 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.31□□□□□ -0.6
Sssca1P56873 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.31□□□□□ -0.6
Sssca1P56873 Gm17971-201ENSMUST00000190239 806 ntBASIC11.31□□□□□ -0.6
Sssca1P56873 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.31□□□□□ -0.6
Sssca1P56873 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.31□□□□□ -0.6
Sssca1P56873 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.31□□□□□ -0.6
Sssca1P56873 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sssca1P56873 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.3□□□□□ -0.6
Sssca1P56873 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.3□□□□□ -0.6
Sssca1P56873 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Sssca1P56873 Gm9385-201ENSMUST00000117563 472 ntBASIC11.3□□□□□ -0.6
Sssca1P56873 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.3□□□□□ -0.6
Sssca1P56873 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.3□□□□□ -0.6
Sssca1P56873 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.3□□□□□ -0.6
Sssca1P56873 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.3□□□□□ -0.6
Sssca1P56873 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.3□□□□□ -0.6
Sssca1P56873 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.3□□□□□ -0.6
Sssca1P56873 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms