Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.03□□□□□ -0.64
Rab4aP56371 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.03□□□□□ -0.64
Rab4aP56371 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rab4aP56371 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Rab4aP56371 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.03□□□□□ -0.64
Rab4aP56371 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Gm45058-201ENSMUST00000205810 766 ntBASIC11.03□□□□□ -0.64
Rab4aP56371 Gm21559-201ENSMUST00000220638 855 ntBASIC11.03□□□□□ -0.64
Rab4aP56371 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.03□□□□□ -0.64
Rab4aP56371 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Gm8587-201ENSMUST00000076538 843 ntBASIC11.03□□□□□ -0.64
Rab4aP56371 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.03□□□□□ -0.64
Rab4aP56371 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.03□□□□□ -0.64
Rab4aP56371 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.03□□□□□ -0.64
Rab4aP56371 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rab4aP56371 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Rab4aP56371 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rab4aP56371 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab4aP56371 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rab4aP56371 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rab4aP56371 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rab4aP56371 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rab4aP56371 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rab4aP56371 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rab4aP56371 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Rab4aP56371 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.02□□□□□ -0.65
Rab4aP56371 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.02□□□□□ -0.65
Rab4aP56371 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.02□□□□□ -0.65
Rab4aP56371 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rab4aP56371 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rab4aP56371 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.02□□□□□ -0.65
Rab4aP56371 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.02□□□□□ -0.65
Rab4aP56371 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.02□□□□□ -0.65
Rab4aP56371 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.02□□□□□ -0.65
Rab4aP56371 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rab4aP56371 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rab4aP56371 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rab4aP56371 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rab4aP56371 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rab4aP56371 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rab4aP56371 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rab4aP56371 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Rab4aP56371 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rab4aP56371 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rab4aP56371 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rab4aP56371 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rab4aP56371 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rab4aP56371 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rab4aP56371 Gm13559-201ENSMUST00000120476 863 ntBASIC11.01□□□□□ -0.65
Rab4aP56371 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.01□□□□□ -0.65
Rab4aP56371 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.01□□□□□ -0.65
Rab4aP56371 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rab4aP56371 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rab4aP56371 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.01□□□□□ -0.65
Rab4aP56371 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.01□□□□□ -0.65
Rab4aP56371 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.01□□□□□ -0.65
Rab4aP56371 Gm19164-201ENSMUST00000210667 640 ntBASIC11.01□□□□□ -0.65
Rab4aP56371 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rab4aP56371 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rab4aP56371 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Rab4aP56371 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.01□□□□□ -0.65
Rab4aP56371 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms