Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NrlP54846 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.89□□□□□ -0.03
NrlP54846 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.89□□□□□ -0.03
NrlP54846 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NrlP54846 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NrlP54846 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NrlP54846 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NrlP54846 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.89□□□□□ -0.03
NrlP54846 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NrlP54846 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NrlP54846 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NrlP54846 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NrlP54846 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.88□□□□□ -0.03
NrlP54846 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.88□□□□□ -0.03
NrlP54846 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.88□□□□□ -0.03
NrlP54846 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.88□□□□□ -0.03
NrlP54846 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.88□□□□□ -0.03
NrlP54846 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NrlP54846 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NrlP54846 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.88□□□□□ -0.03
NrlP54846 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.88□□□□□ -0.03
NrlP54846 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.88□□□□□ -0.03
NrlP54846 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.88□□□□□ -0.03
NrlP54846 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NrlP54846 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NrlP54846 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.87□□□□□ -0.03
NrlP54846 Gm12134-201ENSMUST00000122109 520 ntBASIC14.87□□□□□ -0.03
NrlP54846 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Gm17794-201ENSMUST00000220252 955 ntBASIC14.87□□□□□ -0.03
NrlP54846 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NrlP54846 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NrlP54846 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
NrlP54846 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.87□□□□□ -0.03
NrlP54846 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NrlP54846 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
NrlP54846 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NrlP54846 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NrlP54846 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
NrlP54846 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
NrlP54846 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NrlP54846 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NrlP54846 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
NrlP54846 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NrlP54846 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NrlP54846 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.86□□□□□ -0.03
NrlP54846 Mir1894-201ENSMUST00000122802 81 ntBASIC14.86□□□□□ -0.03
NrlP54846 Mir1982-201ENSMUST00000157368 74 ntBASIC14.86□□□□□ -0.03
NrlP54846 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms