Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.6□□□□□ -0.55
Nkx2-1P50220 Gm45167-201ENSMUST00000208007 322 ntBASIC11.6□□□□□ -0.55
Nkx2-1P50220 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.6□□□□□ -0.55
Nkx2-1P50220 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.6□□□□□ -0.55
Nkx2-1P50220 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-1P50220 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.59□□□□□ -0.55
Nkx2-1P50220 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.59□□□□□ -0.55
Nkx2-1P50220 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.59□□□□□ -0.55
Nkx2-1P50220 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms