Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Sox2P48432 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox2P48432 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.12□□□□□ -0.31
Sox2P48432 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox2P48432 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.12□□□□□ -0.31
Sox2P48432 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sox2P48432 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox2P48432 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox2P48432 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox2P48432 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.12□□□□□ -0.31
Sox2P48432 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.12□□□□□ -0.31
Sox2P48432 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox2P48432 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox2P48432 Gm5864-201ENSMUST00000202263 970 ntBASIC13.12□□□□□ -0.31
Sox2P48432 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.12□□□□□ -0.31
Sox2P48432 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.12□□□□□ -0.31
Sox2P48432 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.12□□□□□ -0.31
Sox2P48432 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox2P48432 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox2P48432 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox2P48432 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox2P48432 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sox2P48432 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox2P48432 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sox2P48432 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.11□□□□□ -0.31
Sox2P48432 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Mir5131-201ENSMUST00000175426 93 ntBASIC13.11□□□□□ -0.31
Sox2P48432 Mir5126-201ENSMUST00000175513 77 ntBASIC13.11□□□□□ -0.31
Sox2P48432 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.11□□□□□ -0.31
Sox2P48432 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox2P48432 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sox2P48432 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox2P48432 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox2P48432 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Sox2P48432 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.11□□□□□ -0.31
Sox2P48432 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Sox2P48432 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sox2P48432 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox2P48432 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox2P48432 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox2P48432 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox2P48432 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox2P48432 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox2P48432 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms