Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC20.58■□□□□ 0.88
Chd1P40201 Gm6335-201ENSMUST00000118081 1194 ntBASIC20.58■□□□□ 0.88
Chd1P40201 Gm7816-201ENSMUST00000119884 1194 ntBASIC20.58■□□□□ 0.88
Chd1P40201 Gm15542-201ENSMUST00000121585 1194 ntBASIC20.58■□□□□ 0.88
Chd1P40201 Gm9211-201ENSMUST00000182882 975 ntBASIC20.58■□□□□ 0.88
Chd1P40201 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC20.58■□□□□ 0.88
Chd1P40201 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Chd1P40201 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 Gm12500-202ENSMUST00000186471 2428 ntBASIC20.58■□□□□ 0.88
Chd1P40201 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.58■□□□□ 0.88
Chd1P40201 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 Gm37411-201ENSMUST00000194180 2282 ntBASIC20.58■□□□□ 0.88
Chd1P40201 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Chd1P40201 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 Gm19459-201ENSMUST00000176240 835 ntBASIC20.57■□□□□ 0.88
Chd1P40201 Gm43058-201ENSMUST00000197645 625 ntBASIC20.57■□□□□ 0.88
Chd1P40201 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC20.57■□□□□ 0.88
Chd1P40201 Gm44136-201ENSMUST00000203819 1106 ntBASIC20.57■□□□□ 0.88
Chd1P40201 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Chd1P40201 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1P40201 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Chd1P40201 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC20.56■□□□□ 0.88
Chd1P40201 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC20.56■□□□□ 0.88
Chd1P40201 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
Chd1P40201 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC20.56■□□□□ 0.88
Chd1P40201 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC20.56■□□□□ 0.88
Chd1P40201 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Chd1P40201 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Chd1P40201 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Chd1P40201 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1P40201 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Chd1P40201 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 AC101945.2-201ENSMUST00000227886 1377 ntBASIC20.55■□□□□ 0.88
Chd1P40201 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Chd1P40201 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC20.55■□□□□ 0.88
Chd1P40201 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Gm27552-201ENSMUST00000183351 62 ntBASIC20.55■□□□□ 0.88
Chd1P40201 Gm27844-201ENSMUST00000183613 62 ntBASIC20.55■□□□□ 0.88
Chd1P40201 Gm9540-201ENSMUST00000188230 478 ntBASIC20.55■□□□□ 0.88
Chd1P40201 AC166095.1-201ENSMUST00000223731 1241 ntBASIC20.55■□□□□ 0.88
Chd1P40201 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1P40201 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1P40201 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1P40201 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Chd1P40201 Gm13045-201ENSMUST00000119019 712 ntBASIC20.54■□□□□ 0.88
Chd1P40201 Gm13408-201ENSMUST00000119822 798 ntBASIC20.54■□□□□ 0.88
Chd1P40201 Gm12539-201ENSMUST00000121549 1098 ntBASIC20.54■□□□□ 0.88
Chd1P40201 Gm13935-201ENSMUST00000121859 798 ntBASIC20.54■□□□□ 0.88
Chd1P40201 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1P40201 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC20.54■□□□□ 0.88
Chd1P40201 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1P40201 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Chd1P40201 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1P40201 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1P40201 Gm8228-201ENSMUST00000189949 2192 ntBASIC20.54■□□□□ 0.88
Chd1P40201 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1P40201 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1P40201 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd1P40201 Gm43908-201ENSMUST00000205074 1472 ntBASIC20.53■□□□□ 0.88
Chd1P40201 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms