Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab5cP35278 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab5cP35278 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rab5cP35278 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab5cP35278 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab5cP35278 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab5cP35278 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab5cP35278 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab5cP35278 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab5cP35278 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab5cP35278 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab5cP35278 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.39□□□□□ -0.59
Rab5cP35278 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Rab5cP35278 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.38□□□□□ -0.59
Rab5cP35278 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Rab5cP35278 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rab5cP35278 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.38□□□□□ -0.59
Rab5cP35278 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Rab5cP35278 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.38□□□□□ -0.59
Rab5cP35278 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.38□□□□□ -0.59
Rab5cP35278 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab5cP35278 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.37□□□□□ -0.59
Rab5cP35278 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rab5cP35278 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rab5cP35278 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.37□□□□□ -0.59
Rab5cP35278 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.37□□□□□ -0.59
Rab5cP35278 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.37□□□□□ -0.59
Rab5cP35278 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Rab5cP35278 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rab5cP35278 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Mir3081-201ENSMUST00000175305 84 ntBASIC11.37□□□□□ -0.59
Rab5cP35278 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Rab5cP35278 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Gm7977-201ENSMUST00000193787 748 ntBASIC11.37□□□□□ -0.59
Rab5cP35278 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.37□□□□□ -0.59
Rab5cP35278 Gm9182-201ENSMUST00000217829 639 ntBASIC11.37□□□□□ -0.59
Rab5cP35278 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rab5cP35278 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.37□□□□□ -0.59
Rab5cP35278 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rab5cP35278 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rab5cP35278 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab5cP35278 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms