Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RxrbP28704 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RxrbP28704 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RxrbP28704 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RxrbP28704 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RxrbP28704 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.06□□□□□ -0.16
RxrbP28704 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
RxrbP28704 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.06□□□□□ -0.16
RxrbP28704 Gm18733-201ENSMUST00000173950 856 ntBASIC14.06□□□□□ -0.16
RxrbP28704 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.06□□□□□ -0.16
RxrbP28704 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RxrbP28704 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.06□□□□□ -0.16
RxrbP28704 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.06□□□□□ -0.16
RxrbP28704 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RxrbP28704 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RxrbP28704 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
RxrbP28704 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.06□□□□□ -0.16
RxrbP28704 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RxrbP28704 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RxrbP28704 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.06□□□□□ -0.16
RxrbP28704 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.06□□□□□ -0.16
RxrbP28704 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
RxrbP28704 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.05□□□□□ -0.16
RxrbP28704 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.05□□□□□ -0.16
RxrbP28704 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
RxrbP28704 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RxrbP28704 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RxrbP28704 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.05□□□□□ -0.16
RxrbP28704 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Gm12882-201ENSMUST00000121696 517 ntBASIC14.05□□□□□ -0.16
RxrbP28704 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.05□□□□□ -0.16
RxrbP28704 Gm5479-201ENSMUST00000160578 435 ntBASIC14.05□□□□□ -0.16
RxrbP28704 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.05□□□□□ -0.16
RxrbP28704 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.05□□□□□ -0.16
RxrbP28704 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.05□□□□□ -0.16
RxrbP28704 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RxrbP28704 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
RxrbP28704 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RxrbP28704 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RxrbP28704 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RxrbP28704 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
RxrbP28704 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Gm16198-201ENSMUST00000118766 670 ntBASIC14.04□□□□□ -0.16
RxrbP28704 Gm13597-201ENSMUST00000121239 375 ntBASIC14.04□□□□□ -0.16
RxrbP28704 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RxrbP28704 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RxrbP28704 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RxrbP28704 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RxrbP28704 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.04□□□□□ -0.16
RxrbP28704 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms