Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.92□□□□□ -0.18
Nckap1P28660 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.92□□□□□ -0.18
Nckap1P28660 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Nckap1P28660 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.92□□□□□ -0.18
Nckap1P28660 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Nckap1P28660 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.92□□□□□ -0.18
Nckap1P28660 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nckap1P28660 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nckap1P28660 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nckap1P28660 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nckap1P28660 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
Nckap1P28660 Gm8602-201ENSMUST00000184045 607 ntBASIC13.91□□□□□ -0.18
Nckap1P28660 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.91□□□□□ -0.18
Nckap1P28660 Gm43438-201ENSMUST00000198133 379 ntBASIC13.91□□□□□ -0.18
Nckap1P28660 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.91□□□□□ -0.18
Nckap1P28660 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nckap1P28660 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Nckap1P28660 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nckap1P28660 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nckap1P28660 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.91□□□□□ -0.18
Nckap1P28660 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.91□□□□□ -0.18
Nckap1P28660 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nckap1P28660 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Nckap1P28660 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nckap1P28660 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nckap1P28660 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.9□□□□□ -0.18
Nckap1P28660 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Nckap1P28660 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.9□□□□□ -0.18
Nckap1P28660 Gm15824-201ENSMUST00000119516 955 ntBASIC13.9□□□□□ -0.18
Nckap1P28660 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Nckap1P28660 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.9□□□□□ -0.18
Nckap1P28660 Gm28911-201ENSMUST00000188837 117 ntBASIC13.9□□□□□ -0.18
Nckap1P28660 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Nckap1P28660 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.9□□□□□ -0.18
Nckap1P28660 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.9□□□□□ -0.18
Nckap1P28660 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Nckap1P28660 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nckap1P28660 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nckap1P28660 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.9□□□□□ -0.18
Nckap1P28660 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nckap1P28660 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nckap1P28660 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms