Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm5354-201ENSMUST00000182417 973 ntBASIC15.3■□□□□ 0.04
Pde6bP23440 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.3■□□□□ 0.04
Pde6bP23440 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.3■□□□□ 0.04
Pde6bP23440 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.3■□□□□ 0.04
Pde6bP23440 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.3■□□□□ 0.04
Pde6bP23440 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Gm25857-201ENSMUST00000082788 129 ntBASIC15.3■□□□□ 0.04
Pde6bP23440 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pde6bP23440 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pde6bP23440 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pde6bP23440 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pde6bP23440 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Gm15957-201ENSMUST00000118893 974 ntBASIC15.29■□□□□ 0.04
Pde6bP23440 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Gm8602-201ENSMUST00000184045 607 ntBASIC15.29■□□□□ 0.04
Pde6bP23440 Gm21470-201ENSMUST00000187680 696 ntBASIC15.29■□□□□ 0.04
Pde6bP23440 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pde6bP23440 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.29■□□□□ 0.04
Pde6bP23440 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.29■□□□□ 0.04
Pde6bP23440 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.29■□□□□ 0.04
Pde6bP23440 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6bP23440 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pde6bP23440 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pde6bP23440 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pde6bP23440 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pde6bP23440 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pde6bP23440 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pde6bP23440 Gm4804-201ENSMUST00000182234 999 ntBASIC15.28■□□□□ 0.04
Pde6bP23440 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.28■□□□□ 0.04
Pde6bP23440 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.28■□□□□ 0.04
Pde6bP23440 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.28■□□□□ 0.04
Pde6bP23440 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.28■□□□□ 0.04
Pde6bP23440 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pde6bP23440 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pde6bP23440 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pde6bP23440 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pde6bP23440 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6bP23440 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pde6bP23440 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pde6bP23440 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Pde6bP23440 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pde6bP23440 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms