Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.24□□□□□ -0.13
Hmga1P17095 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.24□□□□□ -0.13
Hmga1P17095 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hmga1P17095 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hmga1P17095 Gm13829-201ENSMUST00000119600 138 ntBASIC14.24□□□□□ -0.13
Hmga1P17095 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.24□□□□□ -0.13
Hmga1P17095 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hmga1P17095 Gm2445-201ENSMUST00000182798 989 ntBASIC14.24□□□□□ -0.13
Hmga1P17095 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Gm25857-201ENSMUST00000082788 129 ntBASIC14.24□□□□□ -0.13
Hmga1P17095 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmga1P17095 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmga1P17095 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmga1P17095 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmga1P17095 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmga1P17095 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.23□□□□□ -0.13
Hmga1P17095 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmga1P17095 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.23□□□□□ -0.13
Hmga1P17095 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.23□□□□□ -0.13
Hmga1P17095 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.23□□□□□ -0.13
Hmga1P17095 Gm24447-201ENSMUST00000083977 338 ntBASIC14.23□□□□□ -0.13
Hmga1P17095 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Hmga1P17095 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.23□□□□□ -0.13
Hmga1P17095 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Hmga1P17095 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmga1P17095 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmga1P17095 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.22□□□□□ -0.13
Hmga1P17095 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hmga1P17095 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Hmga1P17095 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.22□□□□□ -0.13
Hmga1P17095 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Gm12928-201ENSMUST00000117115 573 ntBASIC14.22□□□□□ -0.13
Hmga1P17095 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmga1P17095 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmga1P17095 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmga1P17095 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmga1P17095 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.22□□□□□ -0.13
Hmga1P17095 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Gm5161-201ENSMUST00000075243 853 ntBASIC14.22□□□□□ -0.13
Hmga1P17095 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Gm5356-201ENSMUST00000093326 615 ntBASIC14.22□□□□□ -0.13
Hmga1P17095 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hmga1P17095 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Hmga1P17095 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.22□□□□□ -0.13
Hmga1P17095 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hmga1P17095 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmga1P17095 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hmga1P17095 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmga1P17095 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmga1P17095 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmga1P17095 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hmga1P17095 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmga1P17095 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hmga1P17095 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms