Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Gm3222-201ENSMUST00000071282 990 ntBASIC14.23□□□□□ -0.13
Rc3h2P0C090 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.23□□□□□ -0.13
Rc3h2P0C090 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.23□□□□□ -0.13
Rc3h2P0C090 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rc3h2P0C090 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Rc3h2P0C090 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Gm8602-201ENSMUST00000184045 607 ntBASIC14.22□□□□□ -0.13
Rc3h2P0C090 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.22□□□□□ -0.13
Rc3h2P0C090 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.22□□□□□ -0.13
Rc3h2P0C090 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.22□□□□□ -0.13
Rc3h2P0C090 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.22□□□□□ -0.13
Rc3h2P0C090 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.22□□□□□ -0.13
Rc3h2P0C090 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rc3h2P0C090 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.21□□□□□ -0.13
Rc3h2P0C090 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Gm43094-201ENSMUST00000196549 921 ntBASIC14.21□□□□□ -0.13
Rc3h2P0C090 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.21□□□□□ -0.13
Rc3h2P0C090 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.21□□□□□ -0.13
Rc3h2P0C090 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rc3h2P0C090 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rc3h2P0C090 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rc3h2P0C090 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h2P0C090 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h2P0C090 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h2P0C090 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rc3h2P0C090 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h2P0C090 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rc3h2P0C090 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.2□□□□□ -0.14
Rc3h2P0C090 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h2P0C090 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms