Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.21□□□□□ -0.29
Krt1P04104 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.21□□□□□ -0.29
Krt1P04104 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Krt1P04104 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.29
Krt1P04104 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.21□□□□□ -0.29
Krt1P04104 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Krt1P04104 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt1P04104 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Krt1P04104 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Krt1P04104 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt1P04104 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Krt1P04104 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.21□□□□□ -0.3
Krt1P04104 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt1P04104 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Krt1P04104 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Krt1P04104 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Krt1P04104 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt1P04104 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.21□□□□□ -0.3
Krt1P04104 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt1P04104 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.2□□□□□ -0.3
Krt1P04104 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.2□□□□□ -0.3
Krt1P04104 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Krt1P04104 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.2□□□□□ -0.3
Krt1P04104 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.2□□□□□ -0.3
Krt1P04104 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.2□□□□□ -0.3
Krt1P04104 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.2□□□□□ -0.3
Krt1P04104 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Krt1P04104 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.2□□□□□ -0.3
Krt1P04104 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Krt1P04104 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Krt1P04104 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Krt1P04104 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Krt1P04104 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Krt1P04104 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Krt1P04104 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.2□□□□□ -0.3
Krt1P04104 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt1P04104 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.19□□□□□ -0.3
Krt1P04104 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.19□□□□□ -0.3
Krt1P04104 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.19□□□□□ -0.3
Krt1P04104 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.19□□□□□ -0.3
Krt1P04104 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Krt1P04104 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Krt1P04104 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Gm11780-201ENSMUST00000136880 516 ntBASIC13.19□□□□□ -0.3
Krt1P04104 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.19□□□□□ -0.3
Krt1P04104 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Krt1P04104 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Krt1P04104 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Krt1P04104 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms