Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Pde6dO55057 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.03□□□□□ -0.64
Pde6dO55057 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pde6dO55057 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pde6dO55057 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Pde6dO55057 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pde6dO55057 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pde6dO55057 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.02□□□□□ -0.64
Pde6dO55057 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pde6dO55057 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pde6dO55057 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pde6dO55057 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.02□□□□□ -0.64
Pde6dO55057 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pde6dO55057 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pde6dO55057 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.02□□□□□ -0.65
Pde6dO55057 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pde6dO55057 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.02□□□□□ -0.65
Pde6dO55057 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.02□□□□□ -0.65
Pde6dO55057 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.02□□□□□ -0.65
Pde6dO55057 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.02□□□□□ -0.65
Pde6dO55057 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.02□□□□□ -0.65
Pde6dO55057 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.02□□□□□ -0.65
Pde6dO55057 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.02□□□□□ -0.65
Pde6dO55057 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Pde6dO55057 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pde6dO55057 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.02□□□□□ -0.65
Pde6dO55057 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pde6dO55057 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Pde6dO55057 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Pde6dO55057 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pde6dO55057 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pde6dO55057 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pde6dO55057 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pde6dO55057 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pde6dO55057 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Pde6dO55057 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.01□□□□□ -0.65
Pde6dO55057 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.01□□□□□ -0.65
Pde6dO55057 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.01□□□□□ -0.65
Pde6dO55057 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Pde6dO55057 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.01□□□□□ -0.65
Pde6dO55057 Gm29518-201ENSMUST00000190858 372 ntBASIC11.01□□□□□ -0.65
Pde6dO55057 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pde6dO55057 Gm37153-201ENSMUST00000193637 231 ntBASIC11.01□□□□□ -0.65
Pde6dO55057 Gm7787-201ENSMUST00000216858 688 ntBASIC11.01□□□□□ -0.65
Pde6dO55057 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pde6dO55057 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms