Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.81□□□□□ -0.52
Cxcl13O55038 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Gm11524-201ENSMUST00000119349 807 ntBASIC11.81□□□□□ -0.52
Cxcl13O55038 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.81□□□□□ -0.52
Cxcl13O55038 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cxcl13O55038 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Cxcl13O55038 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Cxcl13O55038 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Gm9002-201ENSMUST00000178437 499 ntBASIC11.81□□□□□ -0.52
Cxcl13O55038 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.81□□□□□ -0.52
Cxcl13O55038 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.81□□□□□ -0.52
Cxcl13O55038 Gm43094-201ENSMUST00000196549 921 ntBASIC11.81□□□□□ -0.52
Cxcl13O55038 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.81□□□□□ -0.52
Cxcl13O55038 Gm19078-201ENSMUST00000206311 727 ntBASIC11.81□□□□□ -0.52
Cxcl13O55038 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cxcl13O55038 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Cxcl13O55038 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cxcl13O55038 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cxcl13O55038 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.81□□□□□ -0.52
Cxcl13O55038 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Cxcl13O55038 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cxcl13O55038 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxcl13O55038 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Mir698-201ENSMUST00000102164 109 ntBASIC11.8□□□□□ -0.52
Cxcl13O55038 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Gm12134-201ENSMUST00000122109 520 ntBASIC11.8□□□□□ -0.52
Cxcl13O55038 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Gm43433-201ENSMUST00000196573 481 ntBASIC11.8□□□□□ -0.52
Cxcl13O55038 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.8□□□□□ -0.52
Cxcl13O55038 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.8□□□□□ -0.52
Cxcl13O55038 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.8□□□□□ -0.52
Cxcl13O55038 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl13O55038 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl13O55038 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.79□□□□□ -0.52
Cxcl13O55038 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.79□□□□□ -0.52
Cxcl13O55038 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms