Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 CT025525.2-201ENSMUST00000227743 423 ntBASIC15.42■□□□□ 0.06
Sptlc1O35704 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.42■□□□□ 0.06
Sptlc1O35704 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sptlc1O35704 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Sptlc1O35704 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.41■□□□□ 0.06
Sptlc1O35704 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.41■□□□□ 0.06
Sptlc1O35704 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sptlc1O35704 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.41■□□□□ 0.06
Sptlc1O35704 Gm6266-201ENSMUST00000203844 806 ntBASIC15.41■□□□□ 0.06
Sptlc1O35704 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC15.41■□□□□ 0.06
Sptlc1O35704 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.41■□□□□ 0.06
Sptlc1O35704 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Sptlc1O35704 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.41■□□□□ 0.06
Sptlc1O35704 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sptlc1O35704 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Sptlc1O35704 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sptlc1O35704 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Gm18905-201ENSMUST00000205454 928 ntBASIC15.4■□□□□ 0.06
Sptlc1O35704 Gm8679-201ENSMUST00000210651 1036 ntBASIC15.4■□□□□ 0.06
Sptlc1O35704 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sptlc1O35704 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.4■□□□□ 0.06
Sptlc1O35704 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Sptlc1O35704 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.39■□□□□ 0.05
Sptlc1O35704 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC15.39■□□□□ 0.05
Sptlc1O35704 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sptlc1O35704 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.39■□□□□ 0.05
Sptlc1O35704 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.39■□□□□ 0.05
Sptlc1O35704 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms