Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Prrt1O35449 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Prrt1O35449 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Prrt1O35449 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.83□□□□□ -0.52
Prrt1O35449 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.83□□□□□ -0.52
Prrt1O35449 Gm27357-201ENSMUST00000183754 135 ntBASIC11.83□□□□□ -0.52
Prrt1O35449 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.83□□□□□ -0.52
Prrt1O35449 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.83□□□□□ -0.52
Prrt1O35449 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.83□□□□□ -0.52
Prrt1O35449 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.83□□□□□ -0.52
Prrt1O35449 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.83□□□□□ -0.52
Prrt1O35449 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Prrt1O35449 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prrt1O35449 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Prrt1O35449 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.83□□□□□ -0.52
Prrt1O35449 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.83□□□□□ -0.52
Prrt1O35449 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Prrt1O35449 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Prrt1O35449 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Prrt1O35449 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.82□□□□□ -0.52
Prrt1O35449 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Prrt1O35449 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Prrt1O35449 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Gm10275-202ENSMUST00000168697 495 ntBASIC11.82□□□□□ -0.52
Prrt1O35449 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Gm27704-201ENSMUST00000185094 107 ntBASIC11.82□□□□□ -0.52
Prrt1O35449 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.82□□□□□ -0.52
Prrt1O35449 Gm10275-201ENSMUST00000092620 635 ntBASIC11.82□□□□□ -0.52
Prrt1O35449 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Prrt1O35449 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.82□□□□□ -0.52
Prrt1O35449 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Prrt1O35449 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Prrt1O35449 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prrt1O35449 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Prrt1O35449 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.81□□□□□ -0.52
Prrt1O35449 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Prrt1O35449 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Prrt1O35449 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.81□□□□□ -0.52
Prrt1O35449 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Prrt1O35449 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Gm13418-201ENSMUST00000119097 944 ntBASIC11.81□□□□□ -0.52
Prrt1O35449 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prrt1O35449 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Prrt1O35449 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Prrt1O35449 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms