Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cl1O35188 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gm27989-201ENSMUST00000184721 107 ntBASIC13.18□□□□□ -0.3
Cx3cl1O35188 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gm6916-202ENSMUST00000205523 195 ntBASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gm44608-201ENSMUST00000206827 855 ntBASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gm7775-201ENSMUST00000218871 853 ntBASIC13.18□□□□□ -0.3
Cx3cl1O35188 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.18□□□□□ -0.3
Cx3cl1O35188 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cx3cl1O35188 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cl1O35188 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.17□□□□□ -0.3
Cx3cl1O35188 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Cx3cl1O35188 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.17□□□□□ -0.3
Cx3cl1O35188 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.17□□□□□ -0.3
Cx3cl1O35188 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Gm9229-201ENSMUST00000222777 126 ntBASIC13.17□□□□□ -0.3
Cx3cl1O35188 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cl1O35188 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cx3cl1O35188 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms