Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh11xF6ZNL5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Pcdh11xF6ZNL5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Mir7684-201ENSMUST00000183858 60 ntBASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Mir8102-201ENSMUST00000184148 139 ntBASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Gm17837-201ENSMUST00000186435 985 ntBASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Mir497b-201ENSMUST00000093601 125 ntBASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.45■□□□□ 0.06
Pcdh11xF6ZNL5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Gm14767-201ENSMUST00000121559 586 ntBASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Mir6977-201ENSMUST00000184960 64 ntBASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh11xF6ZNL5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh11xF6ZNL5 Gm15460-201ENSMUST00000118147 391 ntBASIC15.43■□□□□ 0.06
Pcdh11xF6ZNL5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.43■□□□□ 0.06
Pcdh11xF6ZNL5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh11xF6ZNL5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms