Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Gm9726-201ENSMUST00000180321 678 ntBASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Gm2451-201ENSMUST00000199447 999 ntBASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Gm10290-201ENSMUST00000200451 999 ntBASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28043E0CXC2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Gm6973-201ENSMUST00000117080 721 ntBASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28043E0CXC2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Gm15483-201ENSMUST00000120338 456 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Gm27494-201ENSMUST00000184735 189 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Gm2756-201ENSMUST00000195851 400 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28043E0CXC2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms