Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx6-2D3Z4R4 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Gm43767-201ENSMUST00000198933 381 ntBASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Gm5417-201ENSMUST00000079706 384 ntBASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx6-2D3Z4R4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx6-2D3Z4R4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-2D3Z4R4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms