Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.2□□□□□ -0.62
Chd6A3KFM7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Gm11591-201ENSMUST00000120063 702 ntBASIC11.2□□□□□ -0.62
Chd6A3KFM7 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Gm27552-201ENSMUST00000183351 62 ntBASIC11.2□□□□□ -0.62
Chd6A3KFM7 Gm27844-201ENSMUST00000183613 62 ntBASIC11.2□□□□□ -0.62
Chd6A3KFM7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Gm6722-201ENSMUST00000221586 390 ntBASIC11.2□□□□□ -0.62
Chd6A3KFM7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd6A3KFM7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.19□□□□□ -0.62
Chd6A3KFM7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Gm13316-201ENSMUST00000140537 691 ntBASIC11.19□□□□□ -0.62
Chd6A3KFM7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.19□□□□□ -0.62
Chd6A3KFM7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Sybu-209ENSMUST00000228639 4113 ntBASIC11.19□□□□□ -0.62
Chd6A3KFM7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.19□□□□□ -0.62
Chd6A3KFM7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.19□□□□□ -0.62
Chd6A3KFM7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.19□□□□□ -0.62
Chd6A3KFM7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.19□□□□□ -0.62
Chd6A3KFM7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Itm2b-204ENSMUST00000228637 783 ntBASIC11.19□□□□□ -0.62
Chd6A3KFM7 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd6A3KFM7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd6A3KFM7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd6A3KFM7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd6A3KFM7 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd6A3KFM7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd6A3KFM7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC11.18□□□□□ -0.62
Chd6A3KFM7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd6A3KFM7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd6A3KFM7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.18□□□□□ -0.62
Chd6A3KFM7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd6A3KFM7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd6A3KFM7 Mir181d-201ENSMUST00000102383 72 ntBASIC11.18□□□□□ -0.62
Chd6A3KFM7 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.18□□□□□ -0.62
Chd6A3KFM7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.18□□□□□ -0.62
Chd6A3KFM7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms