Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubb1A2AQ07 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb1A2AQ07 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.33□□□□□ -0.11
Tubb1A2AQ07 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Tubb1A2AQ07 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb1A2AQ07 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb1A2AQ07 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb1A2AQ07 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb1A2AQ07 Acot6-202ENSMUST00000222921 3622 ntBASIC14.33□□□□□ -0.11
Tubb1A2AQ07 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Gm28630-201ENSMUST00000187806 498 ntBASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Gm6916-202ENSMUST00000205523 195 ntBASIC14.33□□□□□ -0.12
Tubb1A2AQ07 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb1A2AQ07 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Gm15693-201ENSMUST00000120470 637 ntBASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Gm24158-201ENSMUST00000175263 71 ntBASIC14.32□□□□□ -0.12
Tubb1A2AQ07 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Gm18027-201ENSMUST00000218947 619 ntBASIC14.32□□□□□ -0.12
Tubb1A2AQ07 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tubb1A2AQ07 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms